PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G524500.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 304aa    MW: 34098.5 Da    PI: 8.869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G524500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.6e-13128179155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +r++h  +Er+RR+++N+ ++ Lr+l+P++   ++++ + a+i   A++++k+L+
  Prupe.1G524500.2.p 128 QRMTHIVVERNRRKQMNEYLAVLRSLMPQS---YAQRGDQASIIGGAINFVKELE 179
                         79****************************...*******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1014473.92E-596105No hitNo description
CDDcd000834.74E-14126183No hitNo description
SuperFamilySSF474592.49E-17127201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.529127178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-14128193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-10128179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-9133184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MALEAVVYPK EYPFGFGCKD FYSFNGGGAS WGCDFISQEG QNNHIEQHVL NENWDYCSSS  60
PSLLQNVKEW DPNSSPEACT ADQSVPPGHL SAMETPPPPP PPPPPTTTNR RKRRRTRSSK  120
NKEEIENQRM THIVVERNRR KQMNEYLAVL RSLMPQSYAQ RGDQASIIGG AINFVKELEQ  180
LLQSMDSNKR SKQQPLAEFF TFPQFSTRAT QSNNNSAGVQ ANEPNMAQSN SNQWAAADIE  240
VTMVDSHANL KILSKKRPRQ LLKMVAGFQS LRLSVLHLNV TTVDEMVLYS VSVKIFLHKV  300
GVM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110114RKRRR
2110115RKRRRT
3128139RMTHIVVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6894290.0KP689429.1 Prunus pseudocerasus isolate Unigene16433 bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008219358.10.0PREDICTED: transcription factor bHLH94-like
SwissprotQ9C7T45e-76BH096_ARATH; Transcription factor bHLH96
TrEMBLM5XG950.0M5XG95_PRUPE; Uncharacterized protein
STRINGGLYMA14G35560.11e-117(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-73bHLH family protein